Commits · MassChroqR_0.3.0 · PAPPSO / MCQR · GitLab

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Nov 09, 2015
- mcq.select.2pepbyprot checks argument validity, test OK · cd7ca66b
  Olivier Langella authored 9 years ago
  
  MassChroqR_0.3.0
  
  cd7ca66b
Nov 06, 2015
- test select 2 pep by prot · 858b60ef
  Olivier Langella authored 9 years ago
  
  858b60ef
- test select protlist is OK, but the length of protlist is not well defined · 6ce9ff4b
  Olivier Langella authored 9 years ago
  
  6ce9ff4b
- typo · 37c01951
  Olivier Langella authored 9 years ago
  
  37c01951
- test PCA is OK · b03e4c9f
  Olivier Langella authored 9 years ago
  
  b03e4c9f
Nov 03, 2015
- acp : change order of plots · a11275ed
  Anne Frambourg authored 9 years ago
  
  a11275ed
- test_acp.R · c31130be
  Anne Frambourg authored 9 years ago
  
  c31130be
Sep 24, 2015
- display NA number in qprot object · 55566943
  Olivier Langella authored 9 years ago
  
  55566943
- 2 methods to work on natural isotopes, summary updated to display number of NA · 3388e964
  Olivier Langella authored 9 years ago
  
  3388e964
- better error message reading prot and pep tsv files · 08a08c2a
  Olivier Langella authored 9 years ago
  
  08a08c2a
- reading natural isotopes and selecting most abundant · 4ab5f61c
  Olivier Langella authored 9 years ago
  
  4ab5f61c
- test OK for select prot, T test, ratio · d104e862
  Olivier Langella authored 9 years ago
  
  d104e862
Sep 23, 2015
- testing new ratio functions · bb52d529
  Olivier Langella authored 9 years ago
  
  bb52d529
- test procedure · 3e319151
  Olivier Langella authored 9 years ago
  
  3e319151
- new function to compute CVs at peptide or prot level · 7a36d015
  Olivier Langella authored 9 years ago
  
  7a36d015
Sep 15, 2015
- plot protein OK for spectral counting and test updated · bd3dfcd8
  Olivier Langella authored 9 years ago
  
  bd3dfcd8
- mcq.plot.proteins is more robust with better error messages and test procedure · e4e7227e
  Olivier Langella authored 9 years ago
  
  e4e7227e
Sep 09, 2015
- new function on protlist : mcq.grep.prolist and test file · 5ccd009d
  Olivier Langella authored 9 years ago
  
  5ccd009d
Aug 28, 2015
- natural isotope support · 4980fcb4
  Olivier Langella authored 9 years ago
  
  4980fcb4
- forgotten bracket · 34ff3160
  Olivier Langella authored 9 years ago
  
  34ff3160
- adapt spectralcounting to new data structure · 40fd02d1
  Olivier Langella authored 9 years ago
  
  40fd02d1
- adapt spectralcounting to new data structure · a8cfa33b
  Olivier Langella authored 9 years ago
  
  a8cfa33b
Aug 18, 2015
- Merge branch 'devel' of ssh://git.renater.fr:2222/masschroqr into devel · 8c8e2a81
  Anne Frambourg authored 9 years ago
  
  8c8e2a81
- add GLM function · 79619ffa
  Anne Frambourg authored 9 years ago
  
  79619ffa
- try catch adding for error occuring · d347b3c5
  balliau authored 9 years ago
  
  d347b3c5
Aug 17, 2015
- new class for glm · 00201acc
  Anne Frambourg authored 9 years ago
  
  00201acc
Jul 06, 2015
- plot proteins finally works, test scripts added · 801ee8c8
  Olivier Langella authored 9 years ago
  
  801ee8c8
Jul 03, 2015
- better get protlist for pirwise ttest · 4c236d12
  Olivier Langella authored 9 years ago
  
  4c236d12
Jun 29, 2015
- call mcq.select.2pepbyprot with good parameters · 74926086
  Anne Frambourg authored 9 years ago
  
  74926086
Jun 25, 2015
- Merge branch 'devel' of ssh://git.renater.fr:2222/masschroqr into devel · d18d6581
  Olivier Langella authored 9 years ago
  
  d18d6581
- drop peptiz with area==0 · 2c904caf
  Olivier Langella authored 9 years ago
  
  2c904caf
- Merge branch 'devel' of ssh://git.renater.fr:2222/masschroqr into devel · e02c7b4e
  Anne Frambourg authored 9 years ago
  
  e02c7b4e
- duplicate row.names correction in pca plot · 75980757
  Anne Frambourg authored 9 years ago
  
  75980757
Jun 24, 2015
- import stringr · 8409a356
  Olivier Langella authored 9 years ago
  
  8409a356
- trim protein description added to avoid white space before and after · 5260072b
  Olivier Langella authored 9 years ago
  
  5260072b
- accession parsing using stringr word function · c82f6cfa
  Olivier Langella authored 9 years ago
  
  c82f6cfa
- accession parsing using stringr word function · 206c4615
  Olivier Langella authored 9 years ago
  
  206c4615
- english comment · a7f15673
  Olivier Langella authored 9 years ago
  
  a7f15673
- accession parsing fixed at last · 0de75387
  Olivier Langella authored 9 years ago
  
  0de75387
Jun 19, 2015
- correction of the number of correlated peptiz in msg after selection · 4cd2fbc0
  Anne Frambourg authored 9 years ago
  
  4cd2fbc0