[NGL-Bi] Deals with readsets in case of resume pipeline
should we remove them ? Keep them ?
How to get the data base as clean as possible
should we remove them ? Keep them ?
How to get the data base as clean as possible
changed milestone to %Next from V1.20.0
added NGL-Bi New Feature labels
assigned to @jsabban
suppress old readsets if :
If createNGL-Bi_Readsset is not cached and workflow.resume == true
Not a safe idea...
Do this instead :
ReadsetsNGL-Bi.existing
REMOVE_READSETS
process with this file as inputAutomation of removing documents in database is not safe !
The createNGL-Bi_ReadSets.pl
script will produce a list of old readsets, but nextflow will only exports this file. If removing of readsets in this file is needed we will run removeNGL-BiReadsets.pl manualy using the ReadsetsNGL-Bi.existing
file.
mentioned in commit 0dbf55a9
closed