merge dev_jules

See merge request !21

	Ref: #5

	- Get index files in channel
	- New pipeline flag --single_cell true/false
	- Add index files into NGL-Bi

	Ref: #5

	- And dynamic instance in the URL

	Ref: #103

	Ref: #101

	Ref: #100

Next from V1.17.0

See merge request !20

	Ref: #98

	Ref: #97

Hot fix and little new feature for ngl tracability

See merge request !19

	- Only if exists, of course

	Ref: #95

	Re: #94

	- And create again the RunNGL-Bi.created file if needed

	Ref: #93

Hot fix to get ngl-biRunCode from file

See merge request !18

	Ref: #93

upgrade version number

See merge request !17

FastQ namming using NGL api

See merge request !16

	- Name of fastq with info from NGL databases
	- Uniformity with ng6 file names (new pipeline option)
	- Add files to readsets
	- Move MD5SUM process from CORE_PIPELINE to ILLUMINA_QC workflow

	ref: #91

genologin -> genobioinfo

See merge request !15

	To be runable on genobioinfo

	Ref: #88

	Ref: #87

	Ref: #86

	Ref: #85

	The new path is available on both genologin and genobioinfo

Change way to build the params.outdir_prefix

See merge request !14

	Ref: #84

	Ref: #83

	Ref: #80